Sample identity
- Trajectory ID
- RDB002116__7ORJ_1_B-C
- Source structure
- 7ORJ_1_H-T
- Length
- 34 nt
- Canonical chain set
- B-C
- Partition
- train
MD-derived metadata
10.42 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 18.12 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B → C
ACGAGUGUCGUACCAAGCUUGGUAGUACACUACU
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | H |
| C | C | C | T |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
af311132fccdec701e3374111965bae157578317f9b736af61ef6bcdf2431e5d
rna.gro · SHA-256
fe89c144693284b71e240f775ab59a2dcae4c92f49754606322d11f2764b956d
rna.pdb · SHA-256
82150bca9fa183afc9b8a7e5de5bd97daa0b7c506c974c9215ae559581472cef