Sample identity
- Trajectory ID
- RDB002124__7OYA_1_YB
- Source structure
- 7OYA_1_71
- Length
- 120 nt
- Canonical chains
- YB
- Partition
- train
MD-derived metadata
4.16 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 33.04 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
GCUUACGGCCAUACCACCCUGGAAAUGCCCGAUCUCAUCUGAACUCGGAAGUAAAGCAGGGUCGGGCCUGGUUAGUACUUGGAUGGGAGACCGCCUGGGAAUACCAGGUGCUGUAAGCUA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| YB | A | YB | 71 |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
3fd9beddb5029da5ecfe882ed7f4ada07ec924b876b980b9984814725e870ad8
rna.gro · SHA-256
d300abcbbc00dcf55d0a425a8190df7b9a0a43bce883719fe9725972793924d5
rna.pdb · SHA-256
8d989cb94c26da099e7b2668097f196873ed838bd049f20879390e45778e2632