Sample identity
- Trajectory ID
- RDB002311__7XSP_1_B-C
- Source structure
- 7XSP_1_D-A
- Length
- 50 nt
- Canonical chain set
- B-C
- Partition
- train
MD-derived metadata
11.12 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 30.93 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B → C
GGGGCAGAAAAUUGGGACUUAAUGUCACGGUACCCAAUUUUCUGCCCCGG
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | A |
| C | C | C | D |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
65a0fff22501b434fc268b7a2465e3f9af7dd2f199f147b4ef6c2f951f335cd1
rna.gro · SHA-256
fe21051b49c927df99c12972deaafdc22ae3049a7bf79fddf3fe745c2a47803c
rna.pdb · SHA-256
342bc7ece9b03174afb4dda85a783e0c03445a54d5c16bca4af3f3fa221635f9