Sample identity
- Trajectory ID
- RDB002381__8A5I_1_K
- Source structure
- 8A5I_1_B
- Length
- 114 nt
- Canonical chain set
- K
- Partition
- train
MD-derived metadata
10.49 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 33.52 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: K
CUGGUAGUUAUGGCGAGAAGGUCACACCCGUUCCCAUACCGAACACGGUAGUUAAGCUUCUCUGCGCCAAUGGUAGUUGGGGGCUUCCCCCUGCGAGAGUAGGUCGCUGCCGGG
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| K | J | K | B |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
aa7f9c639b9023303503d2ce742dde9c2dac4a588fdb63c911321c629116b0dd
rna.gro · SHA-256
9b932f02b61a86e268cc8ed5b800a1d333197cc4dc076db3f3406d97747f4035
rna.pdb · SHA-256
dc3a72861c5a55da49cd18a41571c4db50b7a4cccca03c79dea215fd53668782