Sample identity
- Trajectory ID
- RDB002518__8GNA_1_B-C
- Source structure
- 8GNA_1_C-J
- Length
- 49 nt
- Canonical chain set
- B-C
- Partition
- train
MD-derived metadata
13.33 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 26.30 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: B → C
ACUUAAUGUCACGGUACCCAAUUUUCUGCCCCGGGGCAGAAAAUUGGGU
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| B | B | B | C |
| C | C | C | J |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
699561cd18dfd00f8a7b68ffc618468a31953032c1dfc654cf04a95a3bb27a01
rna.gro · SHA-256
06b73b46b964a94fb66bf4efca7f95d8c79e4176c75d61b00f1ae3b57248e95f
rna.pdb · SHA-256
10a39926eb32834b9483834dffae90d7f66742a8103c944d963950549498af92