Sample identity
- Trajectory ID
- RDB002540__8HIM_1_C
- Source structure
- 8HIM_1_P
- Length
- 11 nt
- Canonical chain set
- C
- Partition
- train
MD-derived metadata
3.91 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 11.40 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: C
AAAGACCAGGC
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| C | A | C | P |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
93b8d3a24f1f939142eae719778aaa601b93b29979234c4b54e08610ff107db1
rna.gro · SHA-256
862955a673829c0ea3442f13032fb7ffc57c97c2bad279d632fe47932ecaf78c
rna.pdb · SHA-256
e9ab3167f58b1c3ae2a23d4d8229e5867a8825d02015a164a712050979f21ade