Sample identity
- Trajectory ID
- RDB002568__8P4B_1_L
- Source structure
- 8P4B_1_P
- Length
- 22 nt
- Canonical chains
- L
- Partition
- train
MD-derived metadata
9.68 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 18.81 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
GUAACCGGAGAGGGAACCCACU
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| L | L | L | P |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
RNADynBench-v0.1-20261001
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Coming soon |
| rna.gro | Matching initial coordinates / topology | Coming soon |
| rna.pdb | Matching initial structure with PDB chain mapping | Coming soon |
rna.xtc · SHA-256
ecb1479f8f21ede049258cffab8366ca31c711dc7e92afabe24802846b793fa4
rna.gro · SHA-256
967b5544b223f47f5fe3f9d03a930991ea24735d1ae0f839ffa398ad030f419f
rna.pdb · SHA-256
9ad3bafe24e144c11e630cfa850a1d3190fecb0357a8944fa5c955e3c88a17d9