Sample identity
- Trajectory ID
- RDB002573__8P60_1_XB
- Source structure
- 8P60_1_K70
- Length
- 119 nt
- Canonical chain set
- XB
- Partition
- train
MD-derived metadata
10.54 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 37.93 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: XB
AGUUACGGCCAUAUCUACUGAAAAACACCGGAUCCCGUCCGAUCUCCGAAGUUAAGCCAAUAAGAGCCAUGCGAGUAUUAAGGUGGGCGACUACUUGAGAAAGCGUGGUGCUGUAGUUU
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| XB | A | XB | K70 |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
fb533449808012e8908b71c6d6ee2d94252c7df0d8c0bc776c05383afb1e0042
rna.gro · SHA-256
768e1738b6258a2c9899b98dac82e9ef6a0ff8a0dd2ac85acf3509318dae08f0
rna.pdb · SHA-256
15123b313dd0fa91f9a3cad9e41f587dcd290a93b08c502e2a9bef655a7289ed