Sample identity
- Trajectory ID
- RDB002580__8SA5_1_A
- Source structure
- 8SA5_1_A
- Length
- 210 nt
- Canonical chain set
- A
- Partition
- test_flex
MD-derived metadata
7.44 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 41.16 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: A
GGUUAAAGCCUUAUGGUCGCUACCAUUGCACUCCGGUAGCGUUAAAAGGGAAGACGGGUGAGAAUCCCGCGCAGCCCCCGCUACUGUGAGGGAGGACGAAGCCCUAGUAAGCCACUGCCGAAAGGUGGGAAGGCAGGGUGGAGGAUGAGUCCCGAGCCAGGAGACCUGCCAUAAGGUUUUAGAAGUUCGCCUUCGGGGGGAAGGUGAACA
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| A | A | A | A |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
c3f4accec9ab2abe2a2c4b3d6dba53b47a3f9e4afafd98b9f2de4e1f92baeaca
rna.gro · SHA-256
07891656d2be5c7e11c57295622093f069cfc7242b8239f03e2cdb518a1d1c69
rna.pdb · SHA-256
6045175e8e485a0cdda151ad421fea4ddbcf60b4b373b9a08783a5f26083aeed