Sample identity
- Trajectory ID
- RDB002581__8SP0_1_C
- Source structure
- 8SP0_1_C
- Length
- 21 nt
- Canonical chain set
- C
- Partition
- train
MD-derived metadata
14.57 Å
Median heavy-atom RMSD to frame 0, without an additional fit.
- Mean radius of gyration
- 17.63 Å · heavy atoms
- Frames
- 1,001 · 0–100 ns
- Coordinate status
- pass
These are MD statistics, not RNADynNet predictions. Calculation details
Structure & trajectory preview
Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.
The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.
Sequence & chain mapping
Sequence order: C
UGACGGCUCUAAUCUAUUAGU
| Canonical chain | PDB chain | label_asym_id | auth_asym_id |
|---|---|---|---|
| C | C | C | C |
Residue-level mapping and atom ranges will accompany the trajectory package.
Quality information
Current warnings: None recorded in this field.
A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.
Files & integrity
v1.0
| File | Contents | Availability |
|---|---|---|
| rna.xtc | RNA-only coordinates · 1,001 frames | Available on Box |
| rna.gro | Matching initial coordinates / topology | Available on Box |
| rna.pdb | Matching initial structure with PDB chain mapping | Available on Box |
rna.xtc · SHA-256
9f2fe6333535faad5fdb476bbde01ec6d8a01c9c66a7bdd3ee0a9ea5f785a41e
rna.gro · SHA-256
bf2016df906bb92466503615642f21288ff6872268113d8d3f75508cc04a780c
rna.pdb · SHA-256
784577f56678c2fa192bb04763a79efc6f046474cd91a981513209edb886ba46