6DTI · V / W

rna_00003__6DTI_1_V-W

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_00003__6DTI_1_V-W
RNA-Solo ID
rna_00003
Split identity
rna_00003
Source structure
6DTI_1_X-W
Length
15 nt
Canonical chains
V, W
Partition
train

MD-derived metadata

2.67 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
10.24 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGCUACGAACCCGUA
Canonical chainPDB chainlabel_asym_idauth_asym_id
VVVX
WWWW

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

65397436a713b5fb5f035f40d8b4485a9c89f2ba603a0434a43557e633e8d61a

rna.gro · SHA-256

644cdfd65c66f1b0f53c6c9fd9065cea5313eeebdc1901824c9d76a63aa2723b

rna.pdb · SHA-256

4af225891640d4442e43b12f40404f8825df9c099855d4995f98f9d180a66f64