5WT3 · B

rna_00007__5WT3_1_B

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_00007__5WT3_1_B
RNA-Solo ID
rna_00007
Split identity
rna_00007
Source structure
5WT3_1_C
Length
73 nt
Canonical chains
B
Partition
train

MD-derived metadata

2.36 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
22.67 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGGCGGUAGCUCAGCCUGGGAGAGCACCGGACUGAAGAUCCGGGUGUCGGGGGUUCAAAUCCCCCCCGCCCC
Canonical chainPDB chainlabel_asym_idauth_asym_id
BBBC

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

f60a763af21330b7fe5e47f3b7b5428d0e0b4a5743d9cc99e100af8b75401b18

rna.gro · SHA-256

1ec32f601a0af0bc3e3767bc1f4dda63001e49b66df393fb2ea945457d7a9d11

rna.pdb · SHA-256

93a26466b04325b6f5d7055033d756e9c8462caf727ee243bc06359d02d77a1c