5KPW · EB

rna_00011__5KPW_1_EB

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00011__5KPW_1_EB
RNA-Solo ID: rna_00011
Split identity: rna_00011
Source structure: 5KPW_1_31
Length: 77 nt
Canonical chains: EB
Partition: train

MD-derived metadata

3.23 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 23.15 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUCGGUUCAAAUCCGGCCCCCGCAACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
EB	A	EB	31

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

ece700582ef8daac389642f31d73274cd162c00624a214354748ae4f087594a4

rna.gro · SHA-256

dc9e42e1a4fac03e3acf509c4e68d269a335d9ea630e794ef0d24673448d322b

rna.pdb · SHA-256

a63ecf4e7670216345ee04b8ea89df7c67cf374ea584985bb44cc54694faf391