3JCD · EB

rna_00026__3JCD_1_EB

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00026__3JCD_1_EB
RNA-Solo ID: rna_00026
Split identity: rna_00026
Source structure: 3JCD_1_9
Length: 76 nt
Canonical chains: EB
Partition: train

MD-derived metadata

4.64 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 23.77 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
EB	A	EB	9

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

f2f59837128f04e22e76a0cc62667f100878b3574aac03a260c7ed6b2548228e

rna.gro · SHA-256

66ac79af7461f3b26f593daa90364c891e4c0cef3a70a89b811ed73918d72a8d

rna.pdb · SHA-256

3fa2ba3f2c8507f317c3f8e3840239629562f3bce97516f826e245951fed42e3