7AF8 · A

rna_00040__7AF8_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00040__7AF8_1_A
RNA-Solo ID: rna_00040
Split identity: rna_00040
Source structure: 7AF8_1_1
Length: 456 nt
Canonical chains: A
Partition: train

MD-derived metadata

5.62 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 40.38 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	1

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

ededaab0e803a9832328c16988b616d197a854036eb1d98e2d7ce59e66978172

rna.gro · SHA-256

b2f540483f0b955fb0dc62ae4a46ea77a20310ee3d8f40b4ef12f920b05edaa4

rna.pdb · SHA-256

a3c9251d37d5245aaf93d7afc566f053aa5a44cf172835bea86cc1733c87a4a8