7AFD · A

rna_00040__7AFD_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00040__7AFD_1_A
RNA-Solo ID: rna_00040
Split identity: rna_00040
Source structure: 7AFD_1_1
Length: 456 nt
Canonical chains: A
Partition: train

MD-derived metadata

7.92 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 42.76 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	1

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

0c6c8e2ce239a556b0967e0d8397411e6b34d93f4f47369dfac57c8289c3134a

rna.gro · SHA-256

4e609e1a05a5f188a6c2d2f6290dc23af3157b7824385e5f8f103a6a71b16878

rna.pdb · SHA-256

042d1bfcd3ebba49881db811ca2392a2b4fcff17f7009a19bc44dcfa2b65e510