4KR9 · D

rna_00042__4KR9_1_D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00042__4KR9_1_D
RNA-Solo ID: rna_00042
Split identity: rna_00042
Source structure: 4KR9_1_X
Length: 39 nt
Canonical chains: D
Partition: train

MD-derived metadata

5.52 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 17.62 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCCCGGAUAGUGUCCUUGGGAAACCAAGUCCGGGCACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	X

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

f8be0270258ca92dd911e3f755901256702e956ac933b2486c9b7552738b954f

rna.gro · SHA-256

50ba9feb3efa73803a8ebd867a42bf1626ccb6d2e598f7770981802c3db0cba7

rna.pdb · SHA-256

a6138635a6d4a2fb32758fd38b75fa5568730d6ede15a22bcbeb53ec0266e299