1VVJ · Z

rna_00045__1VVJ_1_Z

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00045__1VVJ_1_Z
RNA-Solo ID: rna_00045
Split identity: rna_00045
Source structure: 1VVJ_1_RB
Length: 120 nt
Canonical chains: Z
Partition: train

MD-derived metadata

7.32 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 33.72 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UCCCCCGUGCCCAUAGCGGCGUGGAACCACCCGUUCCCAUUCCGAACACGGAAGUGAAACGCGCCAGCGCCGAUGGUACUGGGCGGGCGACCGCCUGGGAGAGUAGGUCGGUGCGGGGGA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
Z	Z	Z	RB

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

1297ee2710b1d9da430c85c1fb8306ff4eec61b5047b9dae5d34d6784097b95a

rna.gro · SHA-256

dc335811d4b2f99fe4ff392beeb55d3b58d687bb6689ea2839d972578ac2f7c9

rna.pdb · SHA-256

cc43e9f4541567ebf1455e079a4f910de81f11cb59e908ea6cedf45cb73f916d