7OKY · P

rna_00065__7OKY_1_P

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_00065__7OKY_1_P
RNA-Solo ID
rna_00065
Split identity
rna_00065
Source structure
7OKY_1_P
Length
13 nt
Canonical chains
P
Partition
train

MD-derived metadata

7.87 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
11.99 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AGGGAACCCACUA
Canonical chainPDB chainlabel_asym_idauth_asym_id
PPPP

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

eac438aee0b05e8e31c81bc840ad1bf8a75214940de1ae87829d357fd088a4d6

rna.gro · SHA-256

97b6905bbc1d11c4d3faf786834bdb77ceb768927d0878cd5e4644413b0174c3

rna.pdb · SHA-256

0c5b2552782e512a0bf28983a2f5a50e34dbd1f0953e4b95327437574539a4e4