8AMK · A / B / C / D / M / N

rna_00076__8AMK_1_A-B-C-D-M-N

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00076__8AMK_1_A-B-C-D-M-N
RNA-Solo ID: rna_00076
Split identity: rna_00076
Source structure: 8AMK_1_M-N
Length: 54 nt
Canonical chains: A, B, C, D, M, N
Partition: test_flex

MD-derived metadata

4.40 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 20.14 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AUGUGGCAUAUGUGGCAUAUGUGGCAUAUGUGGCAUAUGUGGCAUAUGUGGCAU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B
C	C	C	C
D	D	D	D
M	M	M	M
N	N	N	N

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

50fec5e272f38d34c2312f303567766e38b28b1fc3bd17d4b05631b70d854895

rna.gro · SHA-256

0dab8e2cc7890420efa64ea3b48ade42e88878ca7c38501f5f91d7849357ad1e

rna.pdb · SHA-256

4f836d7d4885a237e4da0990c26fec7f826fc09b3601576777db1b70d33c0583