8AMK · C / D

rna_00076__8AMK_1_C-D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00076__8AMK_1_C-D
RNA-Solo ID: rna_00076
Split identity: rna_00076
Source structure: 8AMK_1_C-D
Length: 18 nt
Canonical chains: C, D
Partition: test_flex

MD-derived metadata

1.39 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 10.74 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AUGUGGCAUAUGUGGCAU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
C	C	C	C
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

3964761b49d1080ab927024810915db12be0b73a530ec816a47cc4407dae7737

rna.gro · SHA-256

7382ec515388c2985b6aab9d1285464f7bfedceb90580f2c84401faae5580e3c

rna.pdb · SHA-256

3800579dfcde6b8782fa55046de84ddff6cfb61139462ad527ece51dec029235