3J6Y · C

rna_00088__3J6Y_1_C

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00088__3J6Y_1_C
RNA-Solo ID: rna_00088
Split identity: rna_00088
Source structure: 3J6Y_1_5S
Length: 121 nt
Canonical chains: C
Partition: train

MD-derived metadata

7.39 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 34.71 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUUGCGGCCAUAUCUACCAGAAAGCACCGUUUCCCGUCCGAUCAACUGUAGUUAAGCUGGUAAGAGCCUGACCGAGUAGUGUAGUGGGUGACCAUACGCGAAACUCAGGUGCUGCAAUCU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
C	A	C	5S

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_00088__3J6Y_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

5ce1f1df85680198bb7154d7f2e823ff7123c9054d2bef3e8bb7c9444ea1392d

rna.gro · SHA-256

873deb11322ed1fe336d9a70be518def8fbfffd4cc412a2c28575052fd288129

rna.pdb · SHA-256

818bc292c9ac99c4ef91e41b651941b17d1a176e4778e9eb16bd03ee4af29f53