8BGU · B

rna_00088__8BGU_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00088__8BGU_1_B
RNA-Solo ID: rna_00088
Split identity: rna_00088
Source structure: 8BGU_1_3
Length: 121 nt
Canonical chains: B
Partition: train

MD-derived metadata

5.70 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 33.67 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUUGCGGCCAUAUCUACCAGAAAGCACCGUUUCCCGUCCGAUCAACUGUAGUUAAGCUGGUAAGAGCCUGACCGAGUAGUGUAGUGGGUGACCAUACGCGAAACUCAGGUGCUGCAAUCU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	3

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

4a2595cf88535479743e50b914ff515cc9971c8909f365232cd122dad94f9103

rna.gro · SHA-256

2cb81eb15e5f6ca50cbde7b719d00f3faddfc7c455354466dc0eb8d02ddbcfe4

rna.pdb · SHA-256

ca28bce7e209603f178c158503a9894d25c82c0de1851c4545e975cf9ef3530d