4V5M · JA

rna_00099__4V5M_1_JA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00099__4V5M_1_JA
RNA-Solo ID: rna_00099
Split identity: rna_00099
Source structure: 4V5M_1_BB
Length: 119 nt
Canonical chains: JA
Partition: train

MD-derived metadata

6.35 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 33.58 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UCCCCCGUGCCCAUAGCGGCGUGGAACCACCCGUUCCCAUUCCGAACACGGAAGUGAAACGCGCCAGCGCCGAUGGUACUGGGCGGGCGACCGCCUGGGAGAGUAGGUCGGUGCGGGGG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
JA	A	JA	BB

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_00099__4V5M_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

6a6d07b55312127ad555188be810c42ea34f13092e287572931568312ae3b6cd

rna.gro · SHA-256

fdcc9debd9d4f567c0fa3e595bc1d57d4273bc461774306411d891e98fa7565e

rna.pdb · SHA-256

89b5bb746b559dfef6a7ca572d3ba4d3f25392a713a38315aeaa6242f2ea0650