1L3D · A

rna_00106__1L3D_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00106__1L3D_1_A
RNA-Solo ID: rna_00106
Split identity: rna_00106
Source structure: 1L3D_1_A
Length: 27 nt
Canonical chains: A
Partition: test_struct

MD-derived metadata

1.63 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 12.00 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCGCGGCACCGUCCGCGGAACAAACGG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

bdfbf9f3ad4d2f8268b948f4904c2c45c561c240f35628f53b5a93dd33194119

rna.gro · SHA-256

71c8237709842cfd5bfaa8b1d446f48349c30fc97a1a3b71a61d2dc684320359

rna.pdb · SHA-256

0baf6d45dcbe371e758d28b8cdc66a1c63b5917390ff47508e80ecf8c63bb9b3