7D3J · B

rna_00113__7D3J_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00113__7D3J_1_B
RNA-Solo ID: rna_00113
Split identity: rna_00113
Source structure: 7D3J_1_B
Length: 43 nt
Canonical chains: B
Partition: train

MD-derived metadata

15.95 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.91 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AUUUUUGUGCCCAUCGUUGGCACUAUUAAGGAAUGGAAUAUAG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rg_spike

Inherited warnings: geometry:rg_spike

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

70e50ce141283a219b3d94f77e96106e916b4d9d9fd60100d81c2cf4096f1108

rna.gro · SHA-256

096b423258f75d7596f113a14219c97a65f2a01339e3dcf44d32d7198ee96240

rna.pdb · SHA-256

82a9b79719ba40e63cf74afa933a053a19211d79a7e32648de847043409dae67