3HHZ · K

rna_00114__3HHZ_1_K

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00114__3HHZ_1_K
RNA-Solo ID: rna_00114
Split identity: rna_00114
Source structure: 3HHZ_1_R
Length: 45 nt
Canonical chains: K
Partition: train

MD-derived metadata

17.96 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 37.93 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

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Canonical chain	PDB chain	label_asym_id	auth_asym_id
K	K	K	R

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rg_spike;geometry:rmsd_high

Inherited warnings: geometry:rg_spike;geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

e510b7f0a505580c4a9d7ca611e72376794ca2b246d6caf060534ad32725c677

rna.gro · SHA-256

f78e458214acd7544c61eab669df4c833a6629a1b7e9419c379f1fdda00d5e38

rna.pdb · SHA-256

ccf56d59458d0ecba8acde59a5778f6865af8a93c2359fa5da8d9e7d82320ee0