1O9M · A / B

rna_00172__1O9M_1_A-B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00172__1O9M_1_A-B
RNA-Solo ID: rna_00172
Split identity: rna_00172
Source structure: 1O9M_1_A-B
Length: 42 nt
Canonical chains: A, B
Partition: train

MD-derived metadata

3.26 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 18.33 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCGUCACACCGGUGAAGUCGCGCGUCACACCGGUGAAGUCGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

1a48cc29ee853e4086db24f496e640c420290bfa5fc393d7c499b718c457a748

rna.gro · SHA-256

bf139e2d555247ba67cb7c17532b5f0930d24f2aea24a4fc09bcf3277a35b830

rna.pdb · SHA-256

c683986c7e0c00194d896158f1051943e49676df5cc37b02715a1c7d8fdf61b2