4P97 · C / D

rna_00178__4P97_1_C-D

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_00178__4P97_1_C-D
RNA-Solo ID
rna_00178
Split identity
rna_00178
Source structure
4P97_1_C-D
Length
27 nt
Canonical chains
C, D
Partition
train

MD-derived metadata

3.62 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
13.87 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGUCUACCCACCUCGCCGAGAGGACGG
Canonical chainPDB chainlabel_asym_idauth_asym_id
CCCC
DDDD

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

9e0b249d1e2fd0d5a3125fb2c205b6463bdc2dec91990f0601f7669918826edd

rna.gro · SHA-256

e337f39b0b9877a321dc39e4c26e93e2e889f1c21b7b8ab295373cce6b94cbdc

rna.pdb · SHA-256

5979ab694adee492a24b97747b13fb01c56da07d743867846a08203d6bc0606c