5XWP · D / E

rna_00180__5XWP_1_D-E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00180__5XWP_1_D-E
RNA-Solo ID: rna_00180
Split identity: rna_00180
Source structure: 5XWP_1_E
Length: 87 nt
Canonical chains: D, E
Partition: train

MD-derived metadata

13.85 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 34.12 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GACCACCCCAAAAAUGAAGGGGACUAAAACACAAAUCUAUCUGAAUAAACUCUUCUUCGGAAGAAGAGUUUAUUCAGAUAGAUUUGU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	E
E	E	E	F

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

acc18b5cb4f89d649d7eae6249ae496c3fc6afe9bea1451d671b65300505c566

rna.gro · SHA-256

c5b8117be2bbcbab814fe96a915bec92c892b349fd862fca9c445f4a8ddf62da

rna.pdb · SHA-256

2244d7017c4c507f57b6d0ad91f7f852c9552d4eb5e98befa6c30aee9fc2728f