4V6G · YB

rna_00189__4V6G_1_YB__repeat01

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_00189__4V6G_1_YB__repeat01
RNA-Solo ID
rna_00189
Split identity
rna_00189
Source structure
4V6G_1_CD
Length
77 nt
Canonical chains
YB
Partition
train

MD-derived metadata

4.19 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
24.60 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGCGGGGUGGAGCAGCCCGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUCGGUUCAAAUCCGGCCCCCGCAACCA
Canonical chainPDB chainlabel_asym_idauth_asym_id
YBAYBCD

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_00189__4V6G_1_A__repeat01

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

d17fc9962c5b37163db53759c4847779d1de2b29999530abdeca38829f52c558

rna.gro · SHA-256

e9d2beb6e5be010c48b6db849031acb9db60909a3c01b20938dbf99932ac646f

rna.pdb · SHA-256

410bdc10928d374eb5310a60ab315e57ff6b0237b17188a9a10e8556325a6c6b