1YKV · B / C / D

rna_00206__1YKV_1_B-C-D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00206__1YKV_1_B-C-D
RNA-Solo ID: rna_00206
Split identity: rna_00206
Source structure: 1YKV_1_D
Length: 87 nt
Canonical chains: B, C, D
Partition: train

MD-derived metadata

9.80 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.31 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGCGAGGCCGUGCCAGCUCUUCGGAGCAAUACUCGGCGGAGCUCGCCCGGGCGAGGCCGUGCCAGCUCUUCGGAGCAAUACUCGGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B
C	C	C	C
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

7feb2f5b55f48e7d7722bfde0b4670d045e683efab34134a13c583ef9ed0f28c

rna.gro · SHA-256

62a324207cfd83236b00831ccc72dd6a6895a162a0891f53f24fe0133a299b36

rna.pdb · SHA-256

d5c4c15de059164b480c37cbc3e3df04b0df798ab6ea97889f507b273fea1e79