5CKI · A

rna_00222__5CKI_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00222__5CKI_1_A
RNA-Solo ID: rna_00222
Split identity: rna_00222
Source structure: 5CKI_1_D
Length: 15 nt
Canonical chains: A
Partition: train

MD-derived metadata

11.38 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 13.76 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCACUAGAUCGGAUG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

1b74df213e63f92273a418d67d99b6d9c9f81e387af229444e477b47f9acc1e8

rna.gro · SHA-256

9aef63b793160ce9f4623e6ea62e3d6de426f158bffcc6b64f3f78b2354d800f

rna.pdb · SHA-256

1ecc674f007a3961ffd407abfc52c323541d34373ad80659b22f315c6a15186f