5CKK · B

rna_00222__5CKK_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00222__5CKK_1_B
RNA-Solo ID: rna_00222
Split identity: rna_00222
Source structure: 5CKK_1_D
Length: 15 nt
Canonical chains: B
Partition: train

MD-derived metadata

7.03 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 16.88 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCACUAGAUCGGAUG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

714d4e82883cc5d47ff8ba4ea9601f9ea7b45b964b2f1f33d622bada82ccc7f8

rna.gro · SHA-256

b0779910be5f6f8f53d394ef5028a7607c2b1243f956bc5e1df4042331b33ea2

rna.pdb · SHA-256

d6988f7e211afa8c06449c13e00b7e37542ec74720c4073fbf44a0141da4ed44