3HJW · D

rna_00224__3HJW_1_D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00224__3HJW_1_D
RNA-Solo ID: rna_00224
Split identity: rna_00224
Source structure: 3HJW_1_D
Length: 58 nt
Canonical chains: D
Partition: train

MD-derived metadata

5.85 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 25.13 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGCCACGGAAACCGCGCGCGGUGAUCAAUGAGCCGCGUUCGCUCCCGUGGCCCACAA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

3bd130a3818947f159aeb065a1e39a6bfc30e47f189d327e2e6ac590dc617519

rna.gro · SHA-256

f473645af14607221e8d305638816bd56646415aae3d6d30a0d7d9a984621ef8

rna.pdb · SHA-256

91188b7c3f0e1f1bc999ba20db51c9081c8e3b90486cce3fd5dd004a47b8760d