7PMQ · E

rna_00252__7PMQ_1_E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00252__7PMQ_1_E
RNA-Solo ID: rna_00252
Split identity: rna_00252
Source structure: 7PMQ_1_E
Length: 42 nt
Canonical chains: E
Partition: val

MD-derived metadata

4.12 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 19.05 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGAAGGGUUUCGACCCUUCCCAAUAUGGCUGUUCGCCAUUU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	E

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

7936f273f47ab60038c4afa763c7b946e714c616629c3d0e61f7d39ab8db168c

rna.gro · SHA-256

be5e7b6bf4ecad52fd97d483b489ef64e0d46ecad0f3e0063dfb2031479ad03c

rna.pdb · SHA-256

a89f0501aed6206922063335e6c14ba6ebffd875965e02dcd33778358d658b99