7PMQ · G

rna_00252__7PMQ_1_G

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_00252__7PMQ_1_G
RNA-Solo ID
rna_00252
Split identity
rna_00252
Source structure
7PMQ_1_G
Length
42 nt
Canonical chains
G
Partition
val

MD-derived metadata

8.30 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
18.78 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGAAGGGUUUCGACCCUUCCCAAUAUGGCUGUUCGCCAUUU
Canonical chainPDB chainlabel_asym_idauth_asym_id
GGGG

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

d07a82d3ead9bc8d2539b572f55b47ce405a6b77b0224f70d46a7fff10e47231

rna.gro · SHA-256

f1fdeb82b83a67451550d6c1103bf80ab603f5e94b8369c8e0a260aec6cb1ab8

rna.pdb · SHA-256

5eb2682df6976288d7668c1bda49f9d777b1ce87e5119c990946cbcc0116854c