8FD3 · M

rna_00265__8FD3_1_M

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00265__8FD3_1_M
RNA-Solo ID: rna_00265
Split identity: rna_00265
Source structure: 8FD3_1_M
Length: 63 nt
Canonical chains: M
Partition: train

MD-derived metadata

20.08 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 41.96 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UUGCUCAAGAGAAGUCAUUUAAUAAGGCCACUGUUAAACGUAGGUGAGUCGUGGCUUUAUGCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
M	M	M	M

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

88842f440a1605265d64696639bf51af04ae55868745503bdd3a8675a078dd84

rna.gro · SHA-256

bb05d83174c4fe6d9e5a0050c6c53df4b37cdd3540217837eca959d6f6da7655

rna.pdb · SHA-256

e5ea7914e5aee13c32adff11727552c433d177d9b3ec7ec53aa5395eb96ef266