3J9W · HA

rna_00294__3J9W_1_HA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00294__3J9W_1_HA
RNA-Solo ID: rna_00294
Split identity: rna_00294
Source structure: 3J9W_1_BB
Length: 112 nt
Canonical chains: HA
Partition: train

MD-derived metadata

8.09 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 33.99 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGGUGGCGAUAGCGAAGAGGUCACACCCGUUCCCAUACCGAACACGGAAGUUAAGCUCUUCAGCGCCGAUGGUAGUCGGGGGUUUCCCCCUGUGAGAGUAGGACGCCGCCAA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
HA	A	HA	BB

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_00294__3J9W_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

f9a9c4a4964778ace00450c271a1db9225182526e06f44cee87f2a077b9ccd14

rna.gro · SHA-256

5cdc53578f51bd533a9d5ec20cec3fa82a131f1cb7fbbae61ba1ad828d420000

rna.pdb · SHA-256

ed22b9c5d605fad747faf460607d5abae1abce631dd0a066a345990a52eb35da