5ZEB · O

rna_00323__5ZEB_1_O

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00323__5ZEB_1_O
RNA-Solo ID: rna_00323
Split identity: rna_00323
Source structure: 5ZEB_1_v
Length: 77 nt
Canonical chains: O
Partition: train

MD-derived metadata

3.74 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.94 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGAUCGUCGGUUCAAAUCCGGCCCCCGCAACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
O	O	O	v

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

c1416b47aeee43687e5a8eb4e9f1e983d1ec9db4906c01450a006396ae8933b9

rna.gro · SHA-256

3176ff5508d3437f651a44e45cc384f227b4b7176966aa2b7df9ef102efbe6c2

rna.pdb · SHA-256

4b1b381d0b3d5a921d87f9c4682582437b5300d94ecb3bbc86d0d325c415a052