5ZEP · V

rna_00323__5ZEP_1_V

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00323__5ZEP_1_V
RNA-Solo ID: rna_00323
Split identity: rna_00323
Source structure: 5ZEP_1_w
Length: 77 nt
Canonical chains: V
Partition: train

MD-derived metadata

3.56 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 23.12 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGAUCGUCGGUUCAAAUCCGGCCCCCGCAACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
V	V	V	w

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

5196888da280ae31905ec3499deac1e6e1d6e470122adfff30e430813f8ba084

rna.gro · SHA-256

01d71c0e7a9c711bcdc14730c61b18eb1e12d2477e14effcc7fdcd6411c52d91

rna.pdb · SHA-256

58a45217821d2c38c789d7be32f06240d71d009b8d190c86a7f21e1be0533712