1SJ3 · A

rna_00338__1SJ3_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00338__1SJ3_1_A
RNA-Solo ID: rna_00338
Split identity: rna_00338
Source structure: 1SJ3_1_R
Length: 73 nt
Canonical chains: A
Partition: train

MD-derived metadata

3.87 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.47 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGGCCGGCAUGGUCCCAGCCUCCUCGCUGGCGCCGGCUGGGCAACACCAUUGCACUCCGGUGGUGAAUGGGAC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	R

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

f862b81f430c412d198a398f2f05bc53a90840362468b2f5ac31bafedf158909

rna.gro · SHA-256

cd92d2e24bfdef4bbd09d3c21c18925f0e5eb5e2e6b315917bfc621b8559a76d

rna.pdb · SHA-256

9fc6664470929ab2cde61003291c1ce186fa5642520f6d7218ec9a9b0a0ef84a