4U38 · A / B / C / D / E / F

rna_00340__4U38_1_A-B-C-D-E-F

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00340__4U38_1_A-B-C-D-E-F
RNA-Solo ID: rna_00340
Split identity: rna_00340
Source structure: 4U38_1_C-D
Length: 42 nt
Canonical chains: A, B, C, D, E, F
Partition: train

MD-derived metadata

2.04 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 16.29 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UAGCUCCGGUGCUAUAGCUCCGGUGCUAUAGCUCCGGUGCUA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B
C	C	C	C
D	D	D	D
E	E	E	E
F	F	F	F

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

d7dc1b2c47e59d7c3748850fdeac40ad823c5f3375d8115d894fe5271c0ea1e1

rna.gro · SHA-256

64371cd5ca544f596f523680728641278548a9f86cf42af9ab63e455e351c2d3

rna.pdb · SHA-256

625475aba5b5ff85e60b55981bd9b6bed2431f8c94b8b356c3d4a8065af19dba