2UXD · V / W

rna_00355__2UXD_1_V-W

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00355__2UXD_1_V-W
RNA-Solo ID: rna_00355
Split identity: rna_00355
Source structure: 2UXD_1_Y-X
Length: 12 nt
Canonical chains: V, W
Partition: train

MD-derived metadata

5.62 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 11.32 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGGGUCCCGAAU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
V	V	V	X
W	W	W	Y

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

7dafb2d22114c91e0feb2d0760bfa232bf37bb9f2c31dd508b5f2e24ee4543ca

rna.gro · SHA-256

4e34e714b0a6792e9e611a0b26762cdc3a77b806db1a30b080f948dad5dee4ea

rna.pdb · SHA-256

a763eec1485c7ce073d64f7e428848caecd59d141dd6e646cfa34625823b501c