4V87 · ZA

rna_00373__4V87_1_ZA__repeat02

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00373__4V87_1_ZA__repeat02
RNA-Solo ID: rna_00373
Split identity: rna_00373
Source structure: 4V87_1_BB
Length: 87 nt
Canonical chains: ZA
Partition: train

MD-derived metadata

6.75 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 24.18 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCCGAGGUGGUGGAAUUGGUAGACACGCUACCUUGAGGUGGUAGUGCCCAAUAGGGCUUACGGGUUCAAGUCCCGUCCUCGGUACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
ZA	A	ZA	BB

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_00373__4V87_1_A__repeat02

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

b89381e6aac1ec8095b7384d0bc52c3b2cc9bdd99bb4e539ea5306c1119eab52

rna.gro · SHA-256

c9f20c0c6c29b18bbdf448faa1d6f013bfd2b7f49657496ea0f1a22be1008733

rna.pdb · SHA-256

ff16db72030f9215be736aa8b6bb66748d311f26baed91ce907cdf2b7b4ee85f