1M5V · A / B / C

rna_00387__1M5V_1_A-B-C

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00387__1M5V_1_A-B-C
RNA-Solo ID: rna_00387
Split identity: rna_00387
Source structure: 1M5V_1_B
Length: 112 nt
Canonical chains: A, B, C
Partition: val

MD-derived metadata

4.25 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 26.19 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGCCACCUGACGUCCUCUCCGGAGAGAGAAGUCAACCAGAGAAACACACCAACCCAUUGCACUCCGGGUUGGUGGUAUAUUACCUGGUACGGGGGAAACUUCGUGGUGGCCG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	M
C	C	C	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

915b6a46fbde93aae76e469069bba1073445279091f12ce19b4c453657b98547

rna.gro · SHA-256

b8016844ec6a52f7195118c1e9aa67bfb7d19e151a3e1857c67cae911149e302

rna.pdb · SHA-256

43b2239d1d4f8e7fc423ea387ad1e34537dcdd667975783b24dcc60c351ba09f