4OL8 · C / E

rna_00404__4OL8_1_C-E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00404__4OL8_1_C-E
RNA-Solo ID: rna_00404
Split identity: rna_00404
Source structure: 4OL8_1_G
Length: 34 nt
Canonical chains: C, E
Partition: val

MD-derived metadata

34.34 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 25.84 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGAGAGAGAGGAAGAUGUGAGAGAGAGGAAGAUG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
C	C	C	C
E	E	E	G

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

27b4abe94608801fddc9a59733c5d7ca3392d8efa3bd0099a9b5fc33d3cf4378

rna.gro · SHA-256

cb3238721ebde3ef6a6b7ed7df62f809162b60885b14b7a7cb903bd5585a082e

rna.pdb · SHA-256

a605be141c98f6a181ad50c0220f267ab1c423d18eec5089315b9774592fefc0