1YYW · E / F / G / H

rna_00408__1YYW_1_E-F-G-H__repeat02

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00408__1YYW_1_E-F-G-H__repeat02
RNA-Solo ID: rna_00408
Split identity: rna_00408
Source structure: 1YYW_1_K-L
Length: 48 nt
Canonical chains: E, F, G, H
Partition: train

MD-derived metadata

6.17 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 20.46 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AAAUAUAUAUUUAAAUAUAUAUUUAAAUAUAUAUUUAAAUAUAUAUUU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	I
F	F	F	J
G	G	G	K
H	H	H	L

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

b035b174f0ab7ed58f97889018e587046db8ce6a50fc40cd5c25a8b73d929fd2

rna.gro · SHA-256

81867226a1f4063cfe7336ed154d9d42465a141710e1c55aeadf93615ead8d47

rna.pdb · SHA-256

8c72093624c9cd6e50195da9964cb071717dd287266555c9bc02094f83c689fe