3U4M · B

rna_00442__3U4M_1_B

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_00442__3U4M_1_B
RNA-Solo ID
rna_00442
Split identity
rna_00442
Source structure
3U4M_1_B
Length
80 nt
Canonical chains
B
Partition
train

MD-derived metadata

8.00 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
21.64 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGAUGCGUAGGAUAGGUGGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACCACCCUUCCC
Canonical chainPDB chainlabel_asym_idauth_asym_id
BBBB

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

abf3165644b67d0977be54a444344c31a5f99b86da3f660bcf412e8c6e9b4da6

rna.gro · SHA-256

1dad3be13cdfeb009a56eb9a08fbe482ecb116425ec48b5192e1ff39ea959d92

rna.pdb · SHA-256

4b371c7f37e28c7829b4058192cbd53b9f1747e39cb7b5577d0b6f41836c7d62