5NPM · B

rna_00442__5NPM_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00442__5NPM_1_B
RNA-Solo ID: rna_00442
Split identity: rna_00442
Source structure: 5NPM_1_B
Length: 80 nt
Canonical chains: B
Partition: train

MD-derived metadata

3.33 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 19.89 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGAUGCGUAGGAUAGGUGGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACCACCCUUCCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

4c3e9ac6b0dbcce3c6526e4ad3ce55e68848fa758a030e1fe6ed51f59a68740f

rna.gro · SHA-256

5dd4d26d4c3ca69855fb3b71b564ab1e20d16b0de8ee7ac42dd0590b348fed16

rna.pdb · SHA-256

5c17e619a380018bc361f2cd6d50439baa8bed10696f851a5db5402a64bc2efe